CRAN Package Check Results for Package phyr

Last updated on 2025-11-11 11:53:29 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 113.39 157.33 270.72 WARN
r-devel-linux-x86_64-debian-gcc 1.1.0 89.76 108.69 198.45 WARN
r-devel-linux-x86_64-fedora-clang 1.1.0 338.00 426.82 764.82 WARN
r-devel-linux-x86_64-fedora-gcc 1.1.3 256.00 633.48 889.48 OK
r-devel-windows-x86_64 1.1.0 132.00 183.00 315.00 WARN
r-patched-linux-x86_64 1.1.0 131.56 146.96 278.52 WARN
r-release-linux-x86_64 1.1.0 126.15 148.39 274.54 WARN
r-release-macos-arm64 1.1.0 42.00 74.00 116.00 OK
r-release-macos-x86_64 1.1.0 48.00 137.00 185.00 OK
r-release-windows-x86_64 1.1.0 137.00 178.00 315.00 WARN
r-oldrel-macos-arm64 1.1.0 45.00 64.00 109.00 NOTE
r-oldrel-macos-x86_64 1.1.0 36.00 94.00 130.00 NOTE
r-oldrel-windows-x86_64 1.1.0 164.00 228.00 392.00 WARN

Check Details

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/phyr.Rcheck/00install.out’ for details. * used C++ compiler: ‘Debian clang version 19.1.7 (10)’ Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/phyr.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-15 (Debian 15.2.0-7) 15.2.0’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/data/gannet/ripley/R/packages/tests-clang/phyr.Rcheck/00install.out’ for details. * used C++ compiler: ‘clang version 21.1.5’ Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.6/phyr.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 14.3.0' Flavor: r-devel-windows-x86_64

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/phyr.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ Flavor: r-patched-linux-x86_64

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/phyr.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ Flavor: r-release-linux-x86_64

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.5/phyr.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 14.3.0' Flavor: r-release-windows-x86_64

Version: 1.1.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘INLA’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.1.0
Check: installed package size
Result: NOTE installed size is 12.1Mb sub-directories of 1Mb or more: doc 2.0Mb libs 9.6Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.1.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: cor_phylo.cpp:76:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:81:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] cor_phylo.cpp:89:23: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.4/phyr.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 13.3.0' Flavor: r-oldrel-windows-x86_64